Structural Complex
Chemical ID: GPC
IUPAC Name: 2'-FLUOROGUANYLYL-(3'-5')-PHOSPHOCYTIDINE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]cnc2c1ncn2[C@H]1C[C@H](O[PH](=O)OC[C@@H]2CC[C@H](n3cccnc3=O)O2)CO1
InChI: InChI=1S/C18H21N6O7P/c25-17-15-16(20-9-21-17)24(10-22-15)14-6-12(7-28-14)31-32(27)29-8-11-2-3-13(30-11)23-5-1-4-19-18(23)26/h1,4-5,9-14,32H,2-3,6-8H2,(H,20,21,25)/t11-,12-,13+,14+/m0/s1
InChI Key: UKLBMCIPDHSPFP-IGQOVBAYSA-N
Physiochemical Descriptor:
Formula: C19 H24 F N8 O11 P
Molecular weight: 590.413
Hydrogen Bond Acceptor: 18
Hydrogen Bond Donor: 7
Rotatable Bonds: 14
Heavy Atoms: 40
Systematic name
Program Version Descriptor
ACDLabs 10.04 (2R,3R,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-4-fluoro-2-(hydroxymethyl)tetrahydrofuran-3-yl [(2R,3S,4R,5R)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl hydrogen (S)-phosphate (non-preferred name)
OpenEye OEToolkits 1.5.0 [(2R,3R,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-4-fluoro-2-(hydroxymethyl)oxolan-3-yl] [(2R,3S,4R,5R)-5-(4-amino-2-oxo-pyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C5NC(=Nc1c5ncn1C4OC(CO)C(OP(=O)(O)OCC3OC(N2C(=O)N=C(N)C=C2)C(O)C3O)C4F)N
SMILES_CANONICAL CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO)[C@@H](O[P@](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)N5C=CC(=NC5=O)N)[C@H]3F
SMILES CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)[CH](O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)N5C=CC(=NC5=O)N)[CH]3F
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O[P@@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)N5C=CC(=NC5=O)N)O)O)F)N=C(NC2=O)N
SMILES OpenEye OEToolkits 1.5.0 c1nc2c(n1C3C(C(C(O3)CO)OP(=O)(O)OCC4C(C(C(O4)N5C=CC(=NC5=O)N)O)O)F)N=C(NC2=O)N
InChI InChI 1.03 InChI=1S/C19H24FN8O11P/c20-9-13(6(3-29)37-16(9)28-5-23-10-14(28)25-18(22)26-15(10)32)39-40(34,35)36-4-7-11(30)12(31)17(38-7)27-2-1-8(21)24-19(27)33/h1-2,5-7,9,11-13,16-17,29-31H,3-4H2,(H,34,35)(H2,21,24,33)(H3,22,25,26,32)/t6-,7-,9-,11-,12-,13-,16-,17-/m1/s1
InChIKey InChI 1.03 ZSBUMMSBXYRQAK-FOJQSULLSA-N
Chemical Database Mapping
Database Reference ID
PubChem 135566220
ZINC ZINC000058631636