Structural Complex
Chemical ID: NMY
IUPAC Name: NEOMYCIN
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: C1CC[C@@H](O[C@@H]2CO[C@@H](O[C@@H]3CCCC[C@H]3O[C@@H]3CCCCO3)C2)OC1
InChI: InChI=1S/C20H34O6/c1-2-8-17(16(7-1)25-19-10-4-6-12-22-19)26-20-13-15(14-23-20)24-18-9-3-5-11-21-18/h15-20H,1-14H2/t15-,16+,17+,18+,19+,20-/m0/s1
InChI Key: YUBLUHFPCGJZSV-IOXPTURASA-N
Physiochemical Descriptor:
Formula: C23 H46 N6 O13
Molecular weight: 614.644
Hydrogen Bond Acceptor: 19
Hydrogen Bond Donor: 13
Rotatable Bonds: 22
Heavy Atoms: 42
Systematic name
Program Version Descriptor
ACDLabs 10.04 (1R,2R,3S,4R,6S)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-beta-L-idopyranosyl)-beta-D-ribofuranosyl]oxy}-3-hydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside
OpenEye OEToolkits 1.5.0 (2R,3S,4R,5R,6R)-5-amino-2-(aminomethyl)-6-[(1R,2R,3S,4R,6S)-4,6-diamino-2-[(2S,3R,4S,5R)-4-[(2R,3R,4R,5S,6S)-3-amino-6-(aminomethyl)-4,5-dihydroxy-oxan-2-yl]oxy-3-hydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3-hydroxy-cyclohexyl]oxy-oxane-3,4-diol
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O(C2C(OC1OC(CN)C(O)C(O)C1N)C(N)CC(N)C2O)C4OC(C(OC3OC(CN)C(O)C(O)C3N)C4O)CO
SMILES_CANONICAL CACTVS 3.341 NC[C@H]1O[C@H](O[C@@H]2[C@@H](N)C[C@@H](N)[C@H](O)[C@H]2O[C@@H]3O[C@H](CO)[C@@H](O[C@H]4O[C@@H](CN)[C@@H](O)[C@H](O)[C@H]4N)[C@H]3O)[C@H](N)[C@@H](O)[C@@H]1O
SMILES CACTVS 3.341 NC[CH]1O[CH](O[CH]2[CH](N)C[CH](N)[CH](O)[CH]2O[CH]3O[CH](CO)[CH](O[CH]4O[CH](CN)[CH](O)[CH](O)[CH]4N)[CH]3O)[CH](N)[CH](O)[CH]1O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1[C@H]([C@@H]([C@H]([C@@H]([C@H]1N)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CN)O)O)N)O[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O[C@@H]4[C@@H]([C@H]([C@@H]([C@@H](O4)CN)O)O)N)O)O)N
SMILES OpenEye OEToolkits 1.5.0 C1C(C(C(C(C1N)OC2C(C(C(C(O2)CN)O)O)N)OC3C(C(C(O3)CO)OC4C(C(C(C(O4)CN)O)O)N)O)O)N
InChI InChI 1.03 InChI=1S/C23H46N6O13/c24-2-7-13(32)15(34)10(28)21(37-7)40-18-6(27)1-5(26)12(31)20(18)42-23-17(36)19(9(4-30)39-23)41-22-11(29)16(35)14(33)8(3-25)38-22/h5-23,30-36H,1-4,24-29H2/t5-,6+,7-,8+,9-,10-,11-,12+,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23+/m1/s1
InChIKey InChI 1.03 PGBHMTALBVVCIT-VCIWKGPPSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB00452
ChEMBL CHEMBL184618
PubChem 8378
ChEBI 7508
ZINC ZINC000071928291
SureChEMBL SCHEMBL3279
HMDB HMDB0015129