Structural Complex
Chemical ID: DHZ
IUPAC Name: 3,4-DIHYDRO-1H-PYRIMIDIN-2-ONE NUCLEOSIDE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1NCC=CN1[C@H]1CCCO1
InChI: InChI=1S/C8H12N2O2/c11-8-9-4-2-5-10(8)7-3-1-6-12-7/h2,5,7H,1,3-4,6H2,(H,9,11)/t7-/m1/s1
InChI Key: IYKVEGJCEUSHDD-SSDOTTSWSA-N
Physiochemical Descriptor:
Formula: C9 H14 N2 O5
Molecular weight: 230.218
Hydrogen Bond Acceptor: 5
Hydrogen Bond Donor: 4
Rotatable Bonds: 5
Heavy Atoms: 16
Systematic name
Program Version Descriptor
ACDLabs 10.04 1-beta-D-ribofuranosyl-3,4-dihydropyrimidin-2(1H)-one
OpenEye OEToolkits 1.5.0 1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-3,4-dihydropyrimidin-2-one
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1NCC=CN1C2OC(C(O)C2O)CO
SMILES_CANONICAL CACTVS 3.341 OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N2C=CCNC2=O
SMILES CACTVS 3.341 OC[CH]1O[CH]([CH](O)[CH]1O)N2C=CCNC2=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1C=CN(C(=O)N1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O
SMILES OpenEye OEToolkits 1.5.0 C1C=CN(C(=O)N1)C2C(C(C(O2)CO)O)O
InChI InChI 1.03 InChI=1S/C9H14N2O5/c12-4-5-6(13)7(14)8(16-5)11-3-1-2-10-9(11)15/h1,3,5-8,12-14H,2,4H2,(H,10,15)/t5-,6-,7-,8-/m1/s1
InChIKey InChI 1.03 NVRAAJMSMZQKRW-WCTZXXKLSA-N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL1232227
PubChem 5288063
ChEBI 41988
ZINC ZINC000033821270
SureChEMBL SCHEMBL3498860