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Structure Feature
Experiment
Ligands & Environment
9S6Z
pdb_00009s6z
10.2210/pdb9s6z/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D NOESY
10 mM NA- sodium phosphate, 50 mM NA- potassium chloride, .5 mM NA- iFRNA1 nucleotide, 90% H2O/10% D2O
60
90% H2O/10% D2O
5
1
178
2
2D HOESY
10 mM NA- sodium phosphate, 50 mM NA- potassium chloride, .5 mM NA- iFRNA1 nucleotide, 90% H2O/10% D2O
60
90% H2O/10% D2O
5
1
178
3
2D TOCSY
10 mM NA- sodium phosphate, 50 mM NA- potassium chloride, .5 mM NA- iFRNA1 nucleotide, 90% H2O/10% D2O
60
90% H2O/10% D2O
5
1
178
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
NMR Refinement
Method
Details
Software
molecular dynamics
?
2
NMR Ensemble Information
Conformer Selection Criteria
all calculated structures submitted
Conformers Calculated Total Number
10
Conformers Submitted Total Number
10
Representative Model
1 (lowest energy)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
refinement
?
TopSpin
Bruker Biospin
2
structure calculation
?
Amber
Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
3
chemical shift assignment
?
NMRFAM-SPARKY
National Magnetic Resonance Facility, University of Wisconsin Madison
4
peak picking
?
NMRFAM-SPARKY
National Magnetic Resonance Facility, University of Wisconsin Madison
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