SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-1H NOESY 0.4 mM RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*CP*AP*GP*CP*AP*GP*C)-3'), 0.02 mM DSS, 1 mM sodium phosphate, 5 mM magnesium chloride, 0.1 mM EDTA, 99.96% D2O 10 99.96% D2O 7 1 288
2 2D 1H-1H COSY 0.4 mM RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*CP*AP*GP*CP*AP*GP*C)-3'), 0.02 mM DSS, 1 mM sodium phosphate, 5 mM magnesium chloride, 0.1 mM EDTA, 99.96% D2O 10 99.96% D2O 7 1 288
3 2D 1H-1H TOCSY 0.4 mM RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*CP*AP*GP*CP*AP*GP*C)-3'), 0.02 mM DSS, 1 mM sodium phosphate, 5 mM magnesium chloride, 0.1 mM EDTA, 99.96% D2O 10 99.96% D2O 7 1 288
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE 700
NMR Refinement
Method Details Software
simulated annealing ? 2
NMR Ensemble Information
Conformer Selection Criteria structures with the least restraint violations
Conformers Calculated Total Number 200
Conformers Submitted Total Number 10
Representative Model 1 (fewest violations)
Computation: NMR Software
# Classification Version Software Name Author
1 chemical shift assignment ? TopSpin Bruker Biospin
2 structure calculation ? Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
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