ELECTRON MICROSCOPY

Sample

Human coxsackievirus A9 (strain Griggs)

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument LEICA EM GP
Cryogen Name ETHANE
Sample Vitrification Details Sample was incubated for 15 s on the grid before blotted from the front for 1.5 s.
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 90678
Reported Resolution (Å) 2.5
Resolution Method FSC 0.143 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space ?
Refinement Protocol ?
Refinement Target ?
Overall B Value 70
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K3 BIOQUANTUM (6k x 4k)
Electron Dose (electrons/Å2) 40
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) 400
Maximum Defocus (nm) 2000
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS ?
Imaging Mode BRIGHT FIELD
Specimen Holder Model ?
Nominal Magnification ?
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION Scipion 3.0.8
CTF CORRECTION Scipion 3.0.8
MODEL FITTING UCSF ChimeraX 1.5
MODEL FITTING Coot 0.9.8.1
INITIAL EULER ASSIGNMENT Scipion 3.0.8
FINAL EULER ASSIGNMENT Scipion 3.0.8
CLASSIFICATION Scipion 3.0.8
RECONSTRUCTION Scipion 3.0.8
MODEL REFINEMENT PHENIX 1.20.1
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?