ELECTRON MICROSCOPY

Sample

Full length structure, S. cerevisiae Tom1

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument LEICA EM GP
Cryogen Name ETHANE
Sample Vitrification Details CHAPSO detergent added to final conc. of 0.3 mM. Sample applied twice.
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 451216
Reported Resolution (Å) 3.0
Resolution Method FSC 0.143 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space ?
Refinement Protocol ?
Refinement Target ?
Overall B Value 121
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K3 BIOQUANTUM (6k x 4k)
Electron Dose (electrons/Å2) 53.687
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model TFS KRIOS
Minimum Defocus (nm) 1100
Maximum Defocus (nm) 2200
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2.7
Imaging Mode BRIGHT FIELD
Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification 105000
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION cryoSPARC 4.4.1
IMAGE ACQUISITION SerialEM 4.1b
CTF CORRECTION cryoSPARC 4.4.1
MODEL FITTING UCSF ChimeraX 1.6.1
MODEL FITTING ISOLDE 1.6.0
MODEL REFINEMENT PHENIX 1.19.2-4158
INITIAL EULER ASSIGNMENT cryoSPARC 4.4.1
FINAL EULER ASSIGNMENT cryoSPARC 4.4.1
CLASSIFICATION cryoSPARC 4.4.1
RECONSTRUCTION cryoSPARC 4.4.1
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?