Home
About
Browse
Covid-19
Organism Classification
Alphafold Collection
Indian Data
Contact
Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
9D69
ELECTRON MICROSCOPY
Sample
EAAT3 monomer with L-Cys bound at iOFS
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
?
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
60670
Reported Resolution (Å)
2.99
Resolution Method
FSC 0.143 CUT-OFF
Other Details
This is number of monomer from C3 expanded particles.
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
?
Refinement Protocol
OTHER
Refinement Target
?
Overall B Value
59.17
Fitting Procedure
?
Details
?
Data Acquisition
Detector Type
GATAN K3 (6k x 4k)
Electron Dose (electrons/Å
2
)
58.25
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI/PHILIPS CM300FEG/T
Minimum Defocus (nm)
800
Maximum Defocus (nm)
2400
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
?
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
?
Nominal Magnification
?
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
PARTICLE SELECTION
RELION
?
CTF CORRECTION
CTFFIND
?
MODEL FITTING
Coot
?
MODEL REFINEMENT
PHENIX
?
INITIAL EULER ASSIGNMENT
cryoSPARC
3
FINAL EULER ASSIGNMENT
cryoSPARC
3
CLASSIFICATION
RELION
3
RECONSTRUCTION
cryoSPARC
3
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION
?