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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
8VAA
pdb_00008vaa
10.2210/pdb8vaa/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ELECTRON MICROSCOPY
Sample
1:1 complex LFAT1's FCC domain with F-actin
Specimen Preperation
Sample Aggregation State
FILAMENT
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
?
3D Reconstruction
Reconstruction Method
HELICAL
Number of Particles
1220462
Reported Resolution (Å)
3.58
Resolution Method
FSC 0.143 CUT-OFF
Other Details
?
Refinement Type
Symmetry Type
HELICAL
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
cross-correlation coefficient
Overall B Value
144
Fitting Procedure
?
Details
Initial models were docked using Chimera's rigid-body fitting followed by real-space refinement in PHENIX
Data Acquisition
Detector Type
GATAN K3 BIOQUANTUM (6k x 4k)
Electron Dose (electrons/Å
2
)
40.68
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI TALOS ARCTICA
Minimum Defocus (nm)
400
Maximum Defocus (nm)
3000
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
?
Imaging Mode
DIFFRACTION
Specimen Holder Model
?
Nominal Magnification
100000
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
200
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
PARTICLE SELECTION
cryoSPARC
?
MODEL FITTING
UCSF ChimeraX
1.25
CLASSIFICATION
cryoSPARC
?
RECONSTRUCTION
cryoSPARC
3.0
MODEL REFINEMENT
PHENIX
9.0
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
NONE
?