SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N TROSY 20 mM sodium phosphate, 0.1 % w/v sodium dodecyl sulfate, 2 mM beta-mercaptoethanol, 5 mM sodium azide, 100 % [U-2H] D2O 0 100 % [U-2H] D2O 7.0 1 298
3 3D HNCO 20 mM sodium phosphate, 0.1 % w/v sodium dodecyl sulfate, 2 mM beta-mercaptoethanol, 5 mM sodium azide, 100 % [U-2H] D2O 0 100 % [U-2H] D2O 7.0 1 298
4 3D HN(CA)CO 20 mM sodium phosphate, 0.1 % w/v sodium dodecyl sulfate, 2 mM beta-mercaptoethanol, 5 mM sodium azide, 100 % [U-2H] D2O 0 100 % [U-2H] D2O 7.0 1 298
5 3D HNCACB 20 mM sodium phosphate, 0.1 % w/v sodium dodecyl sulfate, 2 mM beta-mercaptoethanol, 5 mM sodium azide, 100 % [U-2H] D2O 0 100 % [U-2H] D2O 7.0 1 298
2 3D HN(COCA)CB 20 mM sodium phosphate, 0.1 % w/v sodium dodecyl sulfate, 2 mM beta-mercaptoethanol, 5 mM sodium azide, 100 % [U-2H] D2O 0 100 % [U-2H] D2O 7.0 1 298
6 3D HNCA 20 mM sodium phosphate, 0.1 % w/v sodium dodecyl sulfate, 2 mM beta-mercaptoethanol, 5 mM sodium azide, 100 % [U-2H] D2O 0 100 % [U-2H] D2O 7.0 1 298
7 3D HN(CO)CA 20 mM sodium phosphate, 0.1 % w/v sodium dodecyl sulfate, 2 mM beta-mercaptoethanol, 5 mM sodium azide, 100 % [U-2H] D2O 0 100 % [U-2H] D2O 7.0 1 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE III HD 900
NMR Refinement
Method Details Software
molecular dynamics selection based on rosetta chemical shif potential and total energy 7
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 500000
Conformers Submitted Total Number 20
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 processing ? NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2 peak picking Version 2.4.2 CcpNmr Analysis Skinner SP, Fogh RH, Boucher W, Ragan TJ, Mureddu LG, and Vuister GW.
3 chemical shift assignment Version 2.4.2 CcpNmr Analysis Assign Skinner SP, Fogh RH, Boucher W, Ragan TJ, Mureddu LG, and Vuister GW.
4 data analysis Version 2.4.2 CcpNmr Analysis Skinner SP, Fogh RH, Boucher W, Ragan TJ, Mureddu LG, and Vuister GW.
5 chemical shift calculation ? CS-ROSETTA Shen, Vernon, Baker and Bax
6 structure calculation 2020.08.61146 Rosetta Yarov-Yarovoy V, Schonbrun J, Baker D.
7 refinement 2020.08.61146 Rosetta ivon LG, Moretti R, Baker D
8 geometry optimization 2020.08.61146 Rosetta ivon LG, Moretti R, Baker D