ELECTRON MICROSCOPY

Sample

Coxsackievirus A6 virus-like particle

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument LEICA EM GP
Cryogen Name ETHANE
Sample Vitrification Details Blotting for 10 seconds from the carbon side
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 44582
Reported Resolution (Å) 3.15
Resolution Method FSC 0.143 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space RECIPROCAL
Refinement Protocol FLEXIBLE FIT
Refinement Target Average FSC
Overall B Value 130
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å2) 58.24
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model JEOL 3200FSC
Minimum Defocus (nm) 500
Maximum Defocus (nm) 2500
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 4.1
Imaging Mode BRIGHT FIELD
Specimen Holder Model JEOL 3200FSC CRYOHOLDER
Nominal Magnification 40000
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION cryoSPARC 4.1.1
IMAGE ACQUISITION SerialEM ?
CTF CORRECTION cryoSPARC 4.1.1
MODEL FITTING Coot 0.9.5
INITIAL EULER ASSIGNMENT cryoSPARC 4.1.1
FINAL EULER ASSIGNMENT cryoSPARC 4.1.1
CLASSIFICATION cryoSPARC 4.1.1
RECONSTRUCTION cryoSPARC 4.1.1
MODEL REFINEMENT REFMAC 5
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?
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