SOLUTION NMR


NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-1H NOESY 0.001 M unlabeled RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), 0.001 M unlabled RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3'), 100% D2O 50 100% D2O 5.5 atm 293
2 2D 1H-13C HSQC aliphatic 0.001 M unlabeled RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), 0.001 M unlabled RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3'), 100% D2O 50 100% D2O 5.5 atm 293
3 2D 1H-13C HSQC aromatic 0.001 M unlabeled RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), 0.001 M unlabled RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3'), 100% D2O 50 100% D2O 5.5 atm 293
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE III HD 900
NMR Refinement
Method Details Software
simulated annealing ? 1
NMR Ensemble Information
Conformer Selection Criteria structures with the least restraint violations
Conformers Calculated Total Number 40
Conformers Submitted Total Number 14
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 refinement 2023 AmberTools Case D.
2 structure calculation 3 CYANA Guntert, Mumenthaler and Wuthrich
3 chemical shift assignment ? CARA Keller R., Wuthrich K.
4 peak picking 3 CYANA Guntert, Mumenthaler and Wuthrich