SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-1H NOESY 0.5 M DNA (5'-D(*CP*(FRG)P*CP*(FRG)P*CP*(FRG))-3'), 90% H2O/10% D2O 10 90% H2O/10% D2O 7 1 278
2 2D 1H-1H TOCSY 0.5 M DNA (5'-D(*CP*(FRG)P*CP*(FRG)P*CP*(FRG))-3'), 90% H2O/10% D2O 10 90% H2O/10% D2O 7 1 278
3 2D 1H-1H COSY 0.5 M DNA (5'-D(*CP*(FRG)P*CP*(FRG)P*CP*(FRG))-3'), 90% H2O/10% D2O 10 90% H2O/10% D2O 7 1 278
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker Neo AVANCE 600
NMR Refinement
Method Details Software
molecular dynamics ? 5
NMR Ensemble Information
Conformer Selection Criteria all calculated structures submitted
Conformers Calculated Total Number 10
Conformers Submitted Total Number 10
Representative Model 1 (fewest violations)
Computation: NMR Software
# Classification Version Software Name Author
1 collection ? TopSpin Bruker Biospin
2 processing ? TopSpin Bruker Biospin
3 chemical shift assignment ? NMRFAM-SPARKY Goddard & Kneller
4 structure calculation ? Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
5 refinement ? Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
6 data analysis ? MOLMOL Koradi, Billeter and Wuthrich
7 data analysis ? 3DNA Lu & Olson