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Organism Classification
Alphafold Collection
Indian Data
Contact
Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
8OLT
ELECTRON MICROSCOPY
Sample
Mitochondrial respiratory complex I
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
blot for 10 to 12 seconds before plunging
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
41670
Reported Resolution (Å)
2.84
Resolution Method
FSC 0.143 CUT-OFF
Other Details
This is the combined particles from the two branches of data collected on the two different detectors
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
?
Refinement Target
?
Overall B Value
?
Fitting Procedure
?
Details
?
Data Acquisition
Detector Type
GATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å
2
)
50
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI TITAN KRIOS
Minimum Defocus (nm)
2200
Maximum Defocus (nm)
3400
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.7
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification
47600
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
PARTICLE SELECTION
RELION
3.1
IMAGE ACQUISITION
EPU
?
CTF CORRECTION
RELION
3.1
CTF CORRECTION
CTFFIND
4.1.1
MODEL FITTING
UCSF Chimera
1.13.1
MODEL FITTING
UCSF ChimeraX
1.4
MODEL FITTING
Coot
0.9-pre
MODEL FITTING
Coot
0.9.2
MODEL REFINEMENT
PHENIX
1.18.2-3874
INITIAL EULER ASSIGNMENT
RELION
3.1
FINAL EULER ASSIGNMENT
RELION
3.1
CLASSIFICATION
RELION
3.1
RECONSTRUCTION
RELION
3.1
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION
?