ELECTRON MICROSCOPY

Sample

Nodavirus RNA replication protein A polymerase domain, local refinement

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument FEI VITROBOT MARK IV
Cryogen Name ETHANE
Sample Vitrification Details ?
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 1074227
Reported Resolution (Å) 6.3
Resolution Method FSC 0.143 CUT-OFF
Other Details Local refinement
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space ?
Refinement Protocol FLEXIBLE FIT
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type FEI FALCON III (4k x 4k)
Electron Dose (electrons/Å2) 100
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) 500
Maximum Defocus (nm) 2500
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2.7
Imaging Mode BRIGHT FIELD
Specimen Holder Model ?
Nominal Magnification ?
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION cisTEM 2.0
IMAGE ACQUISITION SerialEM 3.8
CTF CORRECTION cisTEM 2.0
MODEL FITTING UCSF ChimeraX 1.3
MODEL FITTING Coot 0.9.8.1
MODEL FITTING ISOLDE 1.3
MODEL REFINEMENT PHENIX 1.20.1
INITIAL EULER ASSIGNMENT cisTEM 2.0
FINAL EULER ASSIGNMENT cisTEM 2.0
CLASSIFICATION cisTEM 2.0
RECONSTRUCTION cisTEM 2.0
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?
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