X-RAY DIFFRACTION

Crystallization Details
Method pH Temprature Details
X-RAY DIFFRACTION 5.0 289 Enzyme (20 mg/mL) in 25 mM MOPS pH 7.5 and 0.2 M NaCl was mixed in a 1:1 ratio with crystallization condition (0.2 M ammonium citrate pH 5.0, 20% (w/v) PEG 3350). Soaking and cryoprotection of crystals was performed by adding methylsuccinyl-CoA and PEG200 to final concentrations of 16 mM and 40% (v/v), respectively, before crystals were plunge frozen in liquid nitrogen.
Unit Cell:
a: 139.805 Å b: 169.563 Å c: 118.390 Å α: 90.00° β: 90.00° γ: 90.00°
Symmetry:
Space Group: C 2 2 21
Crystal Properties:
Matthew's Coefficient: 2.94 Solvent Content: 58.17
Refinement Statistics
Diffraction ID Structure Solution Method Cross Validation Method Resolution Limit (High) Resolution Limit (Low) Number of Reflections (Observed) Number of Reflections (R-free) Percent Reflections (Observed) R-Work R-Free Mean Isotropic
X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.93 25.01 105172 1997 99.70 0.1744 0.2027 ?
Data Collection
Overall
Resolution Limit (High) Resolution Limit (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.93 25.01 99.7 ? ? 14.6 13.2 ? 105292 ? ? ?
Highest Resolution Shell
# Resolution Limits (Low) Resolution Limits (High) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1 1.93 2.03 ? 98.6 ? ? 12.7 ?
Diffraction
Diffraction experiment
Crystal ID Scattering Type Data Collection Temprature Detector Detector Type Details Collection Date Monochromator Protocol
1 100 K ?
Radiation Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) 0.9763 PETRA III, EMBL c/o DESY P13 (MX1)
Software
Software Name Purpose Version
SCALA data scaling 3.3.22
PHENIX refinement 1.20.1
XDS data reduction 20190315
PHENIX phasing 1.20.1