ELECTRON MICROSCOPY

Sample

Hexameric complex of the oxalyl-CoA synthetase Pcs60p

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument GATAN CRYOPLUNGE 3
Cryogen Name ETHANE
Sample Vitrification Details 90% humidity in the sample chamber. Gentle Blot function, 2.5 seconds
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 819000
Reported Resolution (Å) 3.1
Resolution Method FSC 0.143 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol RIGID BODY FIT
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K2 QUANTUM (4k x 4k)
Electron Dose (electrons/Å2) 63
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model TFS KRIOS
Minimum Defocus (nm) 700
Maximum Defocus (nm) 2200
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 0.01
Imaging Mode BRIGHT FIELD
Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification 105000
Calibrated Magnification 105000
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION crYOLO beta
IMAGE ACQUISITION EPU 1.2
CTF CORRECTION Gctf 1.02
MODEL FITTING UCSF Chimera 1.15
MODEL REFINEMENT PHENIX 1.1
MODEL REFINEMENT Coot 0.9.4
INITIAL EULER ASSIGNMENT SPHIRE 1.2
FINAL EULER ASSIGNMENT SPHIRE 1.3
RECONSTRUCTION SPHIRE 1.3
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?
Feedback Form
Name
Email
Institute
Feedback