X-RAY DIFFRACTION

Crystallization Details
Method pH Temprature Details
X-RAY DIFFRACTION 7.0 293 Purified PAPS reductase from Methanothermococcus thermolithotrophicus at a concentration of 20 mg.ml-1 was anaerobically crystallized inside a Coy tent (N2/H2 at a 96:4 ratio) under yellow light condition. 0.7 ul of PAPSR in 25 mM Tris/HCl pH 7.6, 2 mM dithiothreitol, 0.5 mM FAD, and 10 % v/v glycerol was mixed with 0.7 ul reservoir solution. The drops were spotted in a 96-Well MRC 2-drop crystallization plates in polystyrene (SWISSCI) containing 90 ul of crystallization solution in the reservoir. Crystals appeared after a few days in the following crystallization condition: 35 % v/v 2-Methyl-2,4-pentanediol, 100 mM Tris pH 7.0 and 200 mM NaCl. Prior to transfer to liquid nitrogen, the crystal was soaked in 10 mM disodium 3'-Phosphoadenosine 5'-phosphate for 7 min.
Unit Cell:
a: 63.714 Å b: 123.650 Å c: 88.842 Å α: 90.000° β: 104.440° γ: 90.000°
Symmetry:
Space Group: P 1 21 1
Crystal Properties:
Matthew's Coefficient: 2.23 Solvent Content: 44.84
Refinement Statistics
Diffraction ID Structure Solution Method Cross Validation Method Resolution Limit (High) Resolution Limit (Low) Number of Reflections (Observed) Number of Reflections (R-free) Percent Reflections (Observed) R-Work R-Free Mean Isotropic
X-RAY DIFFRACTION AB INITIO PHASING THROUGHOUT 1.4500 52.0400 146283 7256 62.2900 0.1527 0.1780 32.1826
Data Collection
Overall
Resolution Limit (High) Resolution Limit (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.45 86.04 95.0 0.079 ? 11.9 6.8 ? 146296 ? ? 19.2
Highest Resolution Shell
# Resolution Limits (Low) Resolution Limits (High) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1 1.45 1.64 73.8 ? ? 1.7 7.1 ?
Diffraction
Diffraction experiment
Crystal ID Scattering Type Data Collection Temprature Detector Detector Type Details Collection Date Monochromator Protocol
1 100 K ?
Radiation Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON SLS BEAMLINE X06DA 0.97625 SLS X06DA
Software
Software Name Purpose Version
PHENIX refinement 1.19.2_4158
PDB_EXTRACT data extraction 3.27
autoPROC data reduction .
autoPROC data scaling .
CRANK2 phasing .