SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-1H NOESY 0.3 mM DNA (5'-D(*(DG5)P*GP*CP*TP*AP*(BG)P*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3'), 90% H2O/10% D2O 10 90% H2O/10% D2O 7.0 1 303
2 2D 1H-13C HSQC aromatic 0.3 mM DNA (5'-D(*(DG5)P*GP*CP*TP*AP*(BG)P*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3'), 90% H2O/10% D2O 10 90% H2O/10% D2O 7.0 1 303
3 2D 1H-1H COSY 0.3 mM DNA (5'-D(*(DG5)P*GP*CP*TP*AP*(BG)P*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3'), 90% H2O/10% D2O 10 90% H2O/10% D2O 7.0 1 303
4 2D DQF-COSY 0.3 mM DNA (5'-D(*(DG5)P*GP*CP*TP*AP*(BG)P*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3'), 90% H2O/10% D2O 10 90% H2O/10% D2O 7.0 1 303
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE NEO 600
NMR Refinement
Method Details Software
simulated annealing ? 5
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 10
Conformers Submitted Total Number 10
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 processing 4.0.7 TopSpin Bruker Biospin
2 chemical shift assignment 2.4.2 CcpNmr Analysis CCPN
3 data analysis 2.4.2 CcpNmr Analysis CCPN
4 structure calculation 3.2 X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore
5 refinement 16 Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
6 peak picking ? CcpNmr Analysis CCPN