SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
8 1D 1H 6 mg/mL peptide, 0.03 % TMS, DMSO NA DMSO ? 1 293
7 2D 1H-15N SOFAST 6 mg/mL peptide, 0.03 % TMS, DMSO NA DMSO ? 1 293
2 2D 1H-13C HSQC 6 mg/mL peptide, 0.03 % TMS, DMSO NA DMSO ? 1 293
3 2D 1H-13C HSQC-ed 6 mg/mL peptide, 0.03 % TMS, DMSO NA DMSO ? 1 293
1 2D NOESY 6 mg/mL peptide, 0.03 % TMS, DMSO NA DMSO ? 1 293
6 2D ROESY 6 mg/mL peptide, 0.03 % TMS, DMSO NA DMSO ? 1 293
5 2D DQF-COSY 6 mg/mL peptide, 0.03 % TMS, DMSO NA DMSO ? 1 293
4 2D 1H-1H TOCSY 6 mg/mL peptide, 0.03 % TMS, DMSO NA DMSO ? 1 293
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
2 Bruker AVANCE III 800
NMR Refinement
Method Details Software
na D9.16. 9-residue cyclic peptide with (trans-cis) conformation in d6-DMSO . TC has trans DPR1 and cis DPR8 conformation. 1
NMR Ensemble Information
Conformer Selection Criteria target function
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (medoid)
Computation: NMR Software
# Classification Version Software Name Author
1 refinement 3.98.13 CYANA Guntert, Mumenthaler and Wuthrich
2 peak picking 1.370 NMRFAM-SPARKY Lee, Tonelli, Markley
3 processing v10.9 NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4 data analysis 3.5 and 4.0.9 TopSpin Bruker Biospin on NMR
5 data analysis 5.21.6 PdbStat Tejero, Snyder, Mao, Aramini, Montelione
6 structure calculation 3.98.13 CYANA Guntert, Mumenthaler and Wuthrich