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Organism Classification
Alphafold Collection
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Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
7R7S
ELECTRON MICROSCOPY
Sample
p47-bound p97-R155H mutant with ATPgammaS
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
The grid was blotted for 6 seconds.
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
63353
Reported Resolution (Å)
4.23
Resolution Method
FSC 0.143 CUT-OFF
Other Details
?
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
OTHER
Refinement Target
CC
Overall B Value
124.8
Fitting Procedure
?
Details
?
Data Acquisition
Detector Type
GATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å
2
)
44.4
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI TITAN KRIOS
Minimum Defocus (nm)
-800
Maximum Defocus (nm)
-2500
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.7
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification
48077
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
PARTICLE SELECTION
Topaz
0.2.3
IMAGE ACQUISITION
SerialEM
3.9
CTF CORRECTION
cryoSPARC
2.15
MODEL FITTING
UCSF Chimera
1.14
INITIAL EULER ASSIGNMENT
cryoSPARC
2.15
FINAL EULER ASSIGNMENT
cryoSPARC
2.15
CLASSIFICATION
cryoSPARC
2.15
RECONSTRUCTION
cryoSPARC
2.15
MODEL REFINEMENT
PHENIX
1.18.2-3874
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION
?