SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
2 2D 1H-13C HSQC aliphatic 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
3 2D 1H-13C HSQC aromatic 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
4 3D HNCACB 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
5 3D CBCA(CO)NH 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
6 3D HNCO 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
7 3D iHNCO 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
8 3D H(CCO)NH 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
9 3D (H)CC(CO)NH 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
10 3D HBHA(CO)NH 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
11 3D HCCH-COSY 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
12 3D HCCmHm-TOCSY 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
13 2D (HB)CB(CGCD)HD 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
16 2D (HB)CB(CGCDCE)HE 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
15 3D 1H-13C NOESY aliphatic 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
14 3D 1H-13C NOESY aromatic 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
17 3D 1H-15N NOESY 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
18 X-filtered-, 13C-edited NOESY 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
19 F1, F2, 15N, 13C-filtered NOESY 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
20 X-filtered NOESY 1 mM [U-13C; U-15N] SNX9 SH3, 1 mM EEEV nsP3 peptide, 20 mM sodium phosphate, 50 mM sodium chloride, 93% H2O/7% D2O 0.15 93% H2O/7% D2O 6.5 ambient 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE III 800
NMR Refinement
Method Details Software
simulated annealing - molecular dynamics ? 5
NMR Ensemble Information
Conformer Selection Criteria structures with the least restraint violations
Conformers Calculated Total Number 30
Conformers Submitted Total Number 20
Representative Model 1 (fewest violations)
Computation: NMR Software
# Classification Version Software Name Author
1 collection ? TopSpin Bruker Biospin
2 processing ? TopSpin Bruker Biospin
3 chemical shift assignment ? CcpNmr Analysis CCPN
4 structure calculation ? CYANA Guntert, Mumenthaler and Wuthrich
5 refinement ? Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
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