SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
2 2D 1H-13C HSQC aliphatic 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
3 2D 1H-13C HSQC aromatic 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
4 3D HNCA 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
5 3D HNCACB 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
8 3D CBCA(CO)NH 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
7 3D HNCO 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
6 3D HN(CA)CO 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
9 3D HCCH-TOCSY hCCH 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
11 3D HCCH-TOCSY HcCH 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
10 3D 1H-13C NOESY aliphatic 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
12 3D 1H-13C NOESY aromatic 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
13 3D 1H-15N NOESY 250 uM [U-13C; U-15N] Nucleocapsid protein NTD, 50 mM sodium phosphate, 3 mM sodium azide, 3 mM EDTA, 50 mM sodium chloride, 500 uM PMSF, 95% H2O/5% D2O 50 95% H2O/5% D2O 6.5 1 293
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
2 Bruker AVANCE III 800
NMR Refinement
Method Details Software
distance geometry ? 5
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 150000
Conformers Submitted Total Number 19
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 chemical shift assignment ? CcpNmr Analysis CCPN
2 structure calculation ? ARIA Linge, O'Donoghue and Nilges
3 structure calculation ? CS-ROSETTA Shen, Vernon, Baker and Bax
4 processing ? NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5 refinement ? CS-ROSETTA Shen, Vernon, Baker and Bax