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Organism Classification
Alphafold Collection
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Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
7MDI
ELECTRON MICROSCOPY
Sample
Ribonucleotide reductase inactive complex
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
?
Cryogen Name
ETHANE
Sample Vitrification Details
Plunged using the chameleon (SPT labtech) Glow discharged at 12 mA for 250 s
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
50425
Reported Resolution (Å)
4.3
Resolution Method
FSC 0.143 CUT-OFF
Other Details
?
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
?
Refinement Protocol
?
Refinement Target
?
Overall B Value
?
Fitting Procedure
?
Details
?
Data Acquisition
Detector Type
FEI FALCON III (4k x 4k)
Electron Dose (electrons/Å
2
)
53.15
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI TALOS ARCTICA
Minimum Defocus (nm)
1200
Maximum Defocus (nm)
3100
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.7
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification
92000
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
200
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
PARTICLE SELECTION
Topaz
0.2.3
IMAGE ACQUISITION
EPU
?
CTF CORRECTION
CTFFIND
4
INITIAL EULER ASSIGNMENT
RELION
3.0.8
FINAL EULER ASSIGNMENT
RELION
3.0.8
CLASSIFICATION
RELION
3.0.8
RECONSTRUCTION
RELION
3.0.8
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION
?