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Organism Classification
Alphafold Collection
Indian Data
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Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
7LAR
ELECTRON MICROSCOPY
Sample
PCV2 Replicase in complex with ssDNA
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
4 uL samples were applied to the grids for 3 seconds and blotted using a blot force of 2, a blot time of 4 seconds, and a drain time of 0 seconds.
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
169830
Reported Resolution (Å)
3.8
Resolution Method
FSC 0.143 CUT-OFF
Other Details
Resolution is based on 3DFSC global value
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
Correlation coefficient
Overall B Value
65.3
Fitting Procedure
?
Details
?
Data Acquisition
Detector Type
GATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å
2
)
71.8
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI TITAN KRIOS
Minimum Defocus (nm)
?
Maximum Defocus (nm)
?
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
?
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
?
Nominal Magnification
?
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
CTF CORRECTION
CTFFIND
4
MODEL FITTING
Coot
0.8.9.2
INITIAL EULER ASSIGNMENT
cryoSPARC
2.14
FINAL EULER ASSIGNMENT
cryoSPARC
2.14
RECONSTRUCTION
cryoSPARC
2.14
MODEL REFINEMENT
PHENIX
1.18.2-3874
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION
?