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Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
7KVC
pdb_00007kvc
10.2210/pdb7kvc/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ELECTRON MICROSCOPY
Sample
Decameric complex of Mal de Rio Cuarto virus P9-1 viroplasm protein
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
LEICA EM CPC
Cryogen Name
ETHANE
Sample Vitrification Details
?
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
99682
Reported Resolution (Å)
4.7
Resolution Method
FSC 0.143 CUT-OFF
Other Details
?
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
Correlation coefficient
Overall B Value
170
Fitting Procedure
?
Details
?
Data Acquisition
Detector Type
FEI FALCON III (4k x 4k)
Electron Dose (electrons/Å
2
)
30.0
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI TALOS ARCTICA
Minimum Defocus (nm)
?
Maximum Defocus (nm)
3800
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
?
Imaging Mode
OTHER
Specimen Holder Model
?
Nominal Magnification
120000
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
200
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
PARTICLE SELECTION
Xmipp
?
IMAGE ACQUISITION
Scipion
?
CTF CORRECTION
Gctf
?
MODEL FITTING
PHENIX
?
INITIAL EULER ASSIGNMENT
Scipion
?
FINAL EULER ASSIGNMENT
Scipion
?
CLASSIFICATION
Scipion
?
RECONSTRUCTION
Scipion
?
MODEL REFINEMENT
PHENIX
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION
?