SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
16 3D 1H-15N NOESY 1 mM [U-13C; U-15N] PlAMV replicase peptide, 20 mM [U-2H] sodium acetate, 100 mM [U-2H] SDS, 10 % [U-2H] D2O, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.6 1 310
28 3D 1H-13C NOESY 1 mM [U-13C; U-15N] PlAMV replicase peptide, 20 mM [U-2H] sodium acetate, 100 mM [U-2H] SDS, 10 % [U-2H] D2O, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.6 1 310
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker ava 600
NMR Refinement
Method Details Software
simulated annealing ? 6
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 collection ? TopSpin Bruker Biospin
2 processing ? NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3 chemical shift assignment ? NMRView Johnson, One Moon Scientific
5 chemical shift assignment ? MagRO-NMRView Kobayashi N.
4 structure calculation ? CYANA Guntert, Mumenthaler and Wuthrich
6 refinement ? Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman