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Organism Classification
Alphafold Collection
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Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
7BH1
ELECTRON MICROSCOPY
Sample
KdpFABC in E1 apo state
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
3 uL of protein mixture applied to grid. Blot time 4 seconds, blot force 0, no wait before plunging.
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
202071
Reported Resolution (Å)
3.38
Resolution Method
FSC 0.143 CUT-OFF
Other Details
?
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
Correlation coefficient
Overall B Value
?
Fitting Procedure
?
Details
?
Data Acquisition
Detector Type
GATAN K2 QUANTUM (4k x 4k)
Electron Dose (electrons/Å
2
)
50
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI TITAN KRIOS
Minimum Defocus (nm)
1000
Maximum Defocus (nm)
2200
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.7
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification
81000
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
IMAGE ACQUISITION
SerialEM
?
CTF CORRECTION
cryoSPARC
2.9.0
MODEL FITTING
UCSF Chimera
1.14
INITIAL EULER ASSIGNMENT
cryoSPARC
2.9.0
FINAL EULER ASSIGNMENT
cryoSPARC
2.9.0
CLASSIFICATION
cryoSPARC
2.9.0
RECONSTRUCTION
cryoSPARC
2.9.0
MODEL REFINEMENT
PHENIX
1.18
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION
?