ELECTRON MICROSCOPY

Sample

Natively assembled clathrin coated vesicles

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument FEI VITROBOT MARK IV
Cryogen Name ETHANE
Sample Vitrification Details ?
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 305413
Reported Resolution (Å) 6.3
Resolution Method FSC 0.143 CUT-OFF
Other Details After the final refinement in cisTEM, half-maps were generated in cisTEM and the FSC was calculated with EMAN FSC tools.
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space ?
Refinement Protocol AB INITIO MODEL
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K3 (6k x 4k)
Electron Dose (electrons/Å2) 50
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) 3000
Maximum Defocus (nm) 5000
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2.7
Imaging Mode BRIGHT FIELD
Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification 35000
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION RELION 3
IMAGE ACQUISITION Leginon ?
CTF CORRECTION cisTEM 1
CTF CORRECTION CTFFIND 4
CTF CORRECTION RELION 3
MODEL FITTING Rosetta ?
INITIAL EULER ASSIGNMENT cryoSPARC 2
FINAL EULER ASSIGNMENT cisTEM 1
FINAL EULER ASSIGNMENT RELION 3
RECONSTRUCTION cisTEM 1
MODEL REFINEMENT PHENIX ?
MODEL FITTING Rosetta ?
MODEL REFINEMENT PHENIX ?
MODEL FITTING Rosetta ?
MODEL REFINEMENT PHENIX ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?