6TQL

ELECTRON MICROSCOPY

Sample

Uromodulin (UMOD)/Tamm-Horsfall protein (THP)

Specimen Preperation
Sample Aggregation State FILAMENT
Vitrification Instrument FEI VITROBOT MARK IV
Cryogen Name ETHANE
Sample Vitrification Details ?
3D Reconstruction
Reconstruction Method HELICAL
Number of Particles 94937
Reported Resolution (Å) 3.96
Resolution Method OTHER
Other Details PHENIX ResolveCryoEM FSCref=0.5
Refinement Type
Symmetry Type HELICAL
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol FLEXIBLE FIT
Refinement Target ?
Overall B Value 171
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K2 QUANTUM (4k x 4k)
Electron Dose (electrons/Å2) 45
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) ?
Maximum Defocus (nm) ?
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2.7
Imaging Mode BRIGHT FIELD
Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification 165000
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION RELION 3.0.5
IMAGE ACQUISITION EPU 2.4
CTF CORRECTION Gctf 1.06
MODEL FITTING UCSF Chimera 1.13
MODEL FITTING Coot 0.9
MODEL REFINEMENT PHENIX ?
INITIAL EULER ASSIGNMENT RELION 3.0.5
FINAL EULER ASSIGNMENT RELION 3.0.5
CLASSIFICATION RELION 3.0.5
RECONSTRUCTION RELION 3.0.5
RECONSTRUCTION PHENIX ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?