ELECTRON MICROSCOPY

Sample

NAD(P)H dehydrogenase-like complex (NDH/NDH-1_1/NDH1L) from T.elongatus

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument FEI VITROBOT MARK IV
Cryogen Name ETHANE
Sample Vitrification Details ?
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 81670
Reported Resolution (Å) 3.1
Resolution Method FSC 0.143 CUT-OFF
Other Details A bulk of the model is comprise of EMD-0415 which is at an estimated resolution of 3.1 A, while a portion (NdhF/NdhF1, NdhQ, and NdhC) are from EMD-0425 which is at an estimated resolution of 3.5 A.
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol RIGID BODY FIT
Refinement Target Correlation coefficient
Overall B Value 30
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å2) 50
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) ?
Maximum Defocus (nm) ?
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS ?
Imaging Mode BRIGHT FIELD
Specimen Holder Model ?
Nominal Magnification ?
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
MODEL FITTING PHENIX 1.13
RECONSTRUCTION RELION 3.0.b2
MODEL REFINEMENT PHENIX 1.13
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?