SOLUTION NMR


NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 1D proton 1 mM Plantaricin S-b, 95 % H2O, 5 % [U-2H] D2O, 100 mM [U-2H] DPC, 0.2 mM DSS, 95% H2O/5% D2O 0 95% H2O/5% D2O 6.5 1 298
2 2D DQF-COSY 1 mM Plantaricin S-b, 95 % H2O, 5 % [U-2H] D2O, 100 mM [U-2H] DPC, 0.2 mM DSS, 95% H2O/5% D2O 0 95% H2O/5% D2O 6.5 1 298
3 2D 1H-1H TOCSY 1 mM Plantaricin S-b, 95 % H2O, 5 % [U-2H] D2O, 100 mM [U-2H] DPC, 0.2 mM DSS, 95% H2O/5% D2O 0 95% H2O/5% D2O 6.5 1 298
4 2D 1H-1H NOESY 1 mM Plantaricin S-b, 95 % H2O, 5 % [U-2H] D2O, 100 mM [U-2H] DPC, 0.2 mM DSS, 95% H2O/5% D2O 0 95% H2O/5% D2O 6.5 1 298
5 2D 1H-13C HSQC 1 mM Plantaricin S-b, 95 % H2O, 5 % [U-2H] D2O, 100 mM [U-2H] DPC, 0.2 mM DSS, 95% H2O/5% D2O 0 95% H2O/5% D2O 6.5 1 298
6 2D 1H-15N HSQC 1 mM Plantaricin S-b, 95 % H2O, 5 % [U-2H] D2O, 100 mM [U-2H] DPC, 0.2 mM DSS, 95% H2O/5% D2O 0 95% H2O/5% D2O 6.5 1 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE II 600
NMR Refinement
Method Details Software
molecular dynamics refined using distance and dihedral restraints in DMSO using the RECOORD script 6
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 structure calculation 1.3 CNS Brunger, Adams, Clore, Gros, Nilges and Read
2 data analysis ? TALOS Cornilescu, Delaglio and Bax
3 chemical shift assignment ? CARA Keller and Wuthrich
4 peak picking ? Sparky Goddard
5 collection 2.4 TopSpin Bruker Biospin
6 refinement 1.3 CNS Brunger, Adams, Clore, Gros, Nilges and Read
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