ELECTRON MICROSCOPY

Sample

Staphylococcus phage 80alpha

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument ?
Cryogen Name ETHANE
Sample Vitrification Details ?
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 11843
Reported Resolution (Å) 5.2
Resolution Method FSC 0.143 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol RIGID BODY FIT
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN ULTRASCAN 4000 (4k x 4k)
Electron Dose (electrons/Å2) 15
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) 1250
Maximum Defocus (nm) 3000
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS ?
Imaging Mode BRIGHT FIELD
Specimen Holder Model ?
Nominal Magnification 96000
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 120
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION DoG Picker 0.2
PARTICLE SELECTION FindEM ?
MODEL FITTING UCSF Chimera 1.10.2
MODEL REFINEMENT REFMAC 5.8.0158
MODEL REFINEMENT Coot 0.8.8
MODEL REFINEMENT Coot 0.8.6.1
INITIAL EULER ASSIGNMENT jspr 2016-5-4
FINAL EULER ASSIGNMENT jspr 2016-5-4
CLASSIFICATION jspr 2016-5-4
RECONSTRUCTION jspr 2016-5-4
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING ONLY Estimated with ACE software