SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 0.8 mM [U-99% 13C; U-99% 15N] p75NTR TMD, 3.9 mM 4809F6, 100 mM [U-98% 2H] DPC, 5 % [U-99.9% 2H] DMSO, 90% H2O/10% D2O 20 90% H2O/10% D2O 6.0 1 313
2 2D 1H-13C HSQC aliphatic 0.8 mM [U-99% 13C; U-99% 15N] p75NTR TMD, 3.9 mM 4809F6, 100 mM [U-98% 2H] DPC, 5 % [U-99.9% 2H] DMSO, 90% H2O/10% D2O 20 90% H2O/10% D2O 6.0 1 313
3 2D 1H-13C HSQC aromatic 0.8 mM [U-99% 13C; U-99% 15N] p75NTR TMD, 3.9 mM 4809F6, 100 mM [U-98% 2H] DPC, 5 % [U-99.9% 2H] DMSO, 90% H2O/10% D2O 20 90% H2O/10% D2O 6.0 1 313
4 3D HNCA 0.8 mM [U-99% 13C; U-99% 15N] p75NTR TMD, 3.9 mM 4809F6, 100 mM [U-98% 2H] DPC, 5 % [U-99.9% 2H] DMSO, 90% H2O/10% D2O 20 90% H2O/10% D2O 6.0 1 313
5 3D HN(CO)CA 0.8 mM [U-99% 13C; U-99% 15N] p75NTR TMD, 3.9 mM 4809F6, 100 mM [U-98% 2H] DPC, 5 % [U-99.9% 2H] DMSO, 90% H2O/10% D2O 20 90% H2O/10% D2O 6.0 1 313
6 3D HCCH-TOCSY 0.8 mM [U-99% 13C; U-99% 15N] p75NTR TMD, 3.9 mM 4809F6, 100 mM [U-98% 2H] DPC, 5 % [U-99.9% 2H] DMSO, 90% H2O/10% D2O 20 90% H2O/10% D2O 6.0 1 313
7 2D TOCSY 0.8 mM [U-99% 13C; U-99% 15N] p75NTR TMD, 3.9 mM 4809F6, 100 mM [U-98% 2H] DPC, 5 % [U-99.9% 2H] DMSO, 90% H2O/10% D2O 20 90% H2O/10% D2O 6.0 1 313
8 3D NOESY 0.8 mM [U-99% 13C; U-99% 15N] p75NTR TMD, 3.9 mM 4809F6, 100 mM [U-98% 2H] DPC, 5 % [U-99.9% 2H] DMSO, 90% H2O/10% D2O 20 90% H2O/10% D2O 6.0 1 313
9 2D 1H-13C filtered NOESY 0.8 mM [U-99% 13C; U-99% 15N] p75NTR TMD, 3.9 mM 4809F6, 100 mM [U-98% 2H] DPC, 5 % [U-99.9% 2H] DMSO, 90% H2O/10% D2O 20 90% H2O/10% D2O 6.0 1 313
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE 800
NMR Refinement
Method Details Software
molecular dynamics ? 5
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 10
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 processing ? NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2 chemical shift assignment ? NMRView Johnson, One Moon Scientific
3 structure calculation ? CYANA Guntert, Mumenthaler and Wuthrich
4 peak picking ? NMRView Johnson, One Moon Scientific
5 refinement ? Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman