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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
5UKZ
pdb_00005ukz
10.2210/pdb5ukz/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D TOCSY
3.33 mg/mL NA-1H Pediocin PA-1 M31L, trifluoroethanol/water
0
trifluoroethanol/water
2.8
1
313
4
2D NOESY
3.33 mg/mL NA-1H Pediocin PA-1 M31L, trifluoroethanol/water
0
trifluoroethanol/water
2.8
1
313
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AVANCE III
600
NMR Refinement
Method
Details
Software
na
For this entry, the authors only used chemical shift values without constraints. The authors used the CS-ROSETTA protocol which allows structure determination of proteins based on chemical shift information alone.
2
NMR Ensemble Information
Conformer Selection Criteria
structures with the lowest energy
Conformers Calculated Total Number
40000
Conformers Submitted Total Number
10
Representative Model
1 (lowest energy)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
chemical shift assignment
3.5
TopSpin
Bruker Biospin
2
refinement
3.7
CS-ROSETTA
Shen, Vernon, Baker and Bax
3
structure calculation
3.7
CS-ROSETTA
Shen, Vernon, Baker and Bax