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Organism Classification
Alphafold Collection
Indian Data
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Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
5UKZ
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D TOCSY
3.33 mg/mL NA-1H Pediocin PA-1 M31L, trifluoroethanol/water
0
trifluoroethanol/water
2.8
1
313
4
2D NOESY
3.33 mg/mL NA-1H Pediocin PA-1 M31L, trifluoroethanol/water
0
trifluoroethanol/water
2.8
1
313
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AVANCE III
600
NMR Refinement
Method
Details
Software
na
For this entry, the authors only used chemical shift values without constraints. The authors used the CS-ROSETTA protocol which allows structure determination of proteins based on chemical shift information alone.
2
NMR Ensemble Information
Conformer Selection Criteria
structures with the lowest energy
Conformers Calculated Total Number
40000
Conformers Submitted Total Number
10
Representative Model
1 (lowest energy)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
chemical shift assignment
3.5
TopSpin
Bruker Biospin
2
refinement
3.7
CS-ROSETTA
Shen, Vernon, Baker and Bax
3
structure calculation
3.7
CS-ROSETTA
Shen, Vernon, Baker and Bax