ELECTRON MICROSCOPY

Sample

Zika virus with ZIKV117 Fab

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument GATAN CRYOPLUNGE 3
Cryogen Name ETHANE
Sample Vitrification Details 2.5 uL of sample was deposited on the carbon layer, with double-sided blotting applied twice for 5-6 seconds.
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 8153
Reported Resolution (Å) 6.2
Resolution Method FSC 0.143 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space ?
Refinement Protocol RIGID BODY FIT
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å2) 32.6
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) ?
Maximum Defocus (nm) ?
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2.7
Imaging Mode BRIGHT FIELD
Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification 18000
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION FindEM 2
PARTICLE SELECTION Appion 3.2
IMAGE ACQUISITION Leginon 3.2
CTF CORRECTION Appion 3.2
CTF CORRECTION CTFFIND 3
MODEL FITTING EMfit ?
MODEL FITTING UCSF Chimera ?
INITIAL EULER ASSIGNMENT jspr ?
FINAL EULER ASSIGNMENT jspr ?
CLASSIFICATION RELION 1.4
RECONSTRUCTION jspr ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?
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