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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
5TLQ
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D 1H-13C HSQC
0.3 mM [U-98% 13C; U-98% 15N] PaDsbA1, 3.3 mM 3-((2-methylbenzyl)thio)-4H-1,2,4-triazol-4-amine, 97.3%D2O+1.7%D6-DMSO
50 mM NaCl and 50 mM sodium phosphate
97.3%D2O+1.7%D6-DMSO
7.4
1
298
3
3D F1-13C,15N filtered F3-13Cedited [1H,1H]-NOESY
0.3 mM [U-98% 13C; U-98% 15N] PaDsbA1, 3.3 mM 3-((2-methylbenzyl)thio)-4H-1,2,4-triazol-4-amine, 97.3%D2O+1.7%D6-DMSO
50 mM NaCl and 50 mM sodium phosphate
97.3%D2O+1.7%D6-DMSO
7.4
1
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AVANCE II
800
NMR Refinement
Method
Details
Software
simulated annealing
2MBT from the same group was used for HADDOCK model building
3
NMR Ensemble Information
Conformer Selection Criteria
structures with the lowest energy
Conformers Calculated Total Number
200
Conformers Submitted Total Number
10
Representative Model
1 (lowest energy)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
processing
?
TopSpin
Bruker Biospin
2
chemical shift assignment
?
CARA
Keller and Wuthrich
3
structure calculation
?
HADDOCK
Bonvin
4
peak picking
?
XEASY
Bartels et al.
5
refinement
?
HADDOCK
Bonvin