ELECTRON MICROSCOPY

Sample

Enterobacteria phage MS2

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument FEI VITROBOT MARK II
Cryogen Name ETHANE
Sample Vitrification Details ?
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 339718
Reported Resolution (Å) 3.6
Resolution Method FSC 0.143 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol AB INITIO MODEL
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å2) 50
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) ?
Maximum Defocus (nm) ?
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2.7
Imaging Mode BRIGHT FIELD
Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification 130000
Calibrated Magnification 47170
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details EFTEM mode with Gatan GIF energy filter.
Imaging Experiment
Task Software Package Version
IMAGE ACQUISITION Leginon ?
CTF CORRECTION CTFFIND3 ?
MODEL FITTING UCSF Chimera 1.10
INITIAL EULER ASSIGNMENT FREALIGN 9.11
FINAL EULER ASSIGNMENT FREALIGN 9.11
CLASSIFICATION RELION 1.4
RECONSTRUCTION FREALIGN 9.11
MODEL REFINEMENT PHENIX dev_1827
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION ?
Feedback Form
Name
Email
Institute
Feedback