ELECTRON MICROSCOPY

Sample

Yfh1-Isu1

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument
Cryogen Name
Sample Vitrification Details
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 4153
Reported Resolution (Å) 17.5
Resolution Method FSC 0.143 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol RIGID BODY FIT
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN ULTRASCAN 4000 (4k x 4k)
Electron Dose (electrons/Å2) 30
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TECNAI F30
Minimum Defocus (nm) 210
Maximum Defocus (nm) 2800
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2
Imaging Mode BRIGHT FIELD
Specimen Holder Model SIDE ENTRY, EUCENTRIC
Nominal Magnification 115000
Calibrated Magnification 115000
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION EMAN2 2.06
IMAGE ACQUISITION DigitalMicrograph 1.6
CTF CORRECTION EMAN2 2.06
MODEL FITTING UCSF Chimera 1.1
MODEL REFINEMENT Situs 2.3
MODEL REFINEMENT NAMD 2.1
MODEL REFINEMENT Coot 0.8.1
RECONSTRUCTION EMAN2 2.06
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING ONLY The ctf.auto function from EMAN2 was applied.