SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 450 uM [U-13C; U-15N] Lipase-interaction domain 1, 90% H2O/10% D2O 20 90% H2O/10% D2O 7.4 1 303
2 2D 1H-13C HSQC 450 uM [U-13C; U-15N] Lipase-interaction domain 1, 90% H2O/10% D2O 20 90% H2O/10% D2O 7.4 1 303
3 3D HNCO 450 uM [U-13C; U-15N] Lipase-interaction domain 1, 90% H2O/10% D2O 20 90% H2O/10% D2O 7.4 1 303
4 3D HN(CA)CO 450 uM [U-13C; U-15N] Lipase-interaction domain 1, 90% H2O/10% D2O 20 90% H2O/10% D2O 7.4 1 303
5 3D HN(COCA)CB 450 uM [U-13C; U-15N] Lipase-interaction domain 1, 90% H2O/10% D2O 20 90% H2O/10% D2O 7.4 1 303
6 3D HNCACB 450 uM [U-13C; U-15N] Lipase-interaction domain 1, 90% H2O/10% D2O 20 90% H2O/10% D2O 7.4 1 303
9 3D HCCH-TOCSY 450 uM [U-13C; U-15N] Lipase-interaction domain 1, 90% H2O/10% D2O 20 90% H2O/10% D2O 7.4 1 303
8 3D 1H-15N NOESY 450 uM [U-13C; U-15N] Lipase-interaction domain 1, 90% H2O/10% D2O 20 90% H2O/10% D2O 7.4 1 303
7 3D 1H-13C NOESY 450 uM [U-13C; U-15N] Lipase-interaction domain 1, 90% H2O/10% D2O 20 90% H2O/10% D2O 7.4 1 303
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE III 600
NMR Refinement
Method Details Software
molecular dynamics ? 7
NMR Ensemble Information
Conformer Selection Criteria target function
Conformers Calculated Total Number 20
Conformers Submitted Total Number 20
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 collection ? TopSpin Bruker Biospin
2 processing ? TopSpin Bruker Biospin
3 chemical shift assignment ? CARA Keller and Wuthrich
4 structure calculation ? CYANA Guntert, Mumenthaler and Wuthrich
5 geometry optimization ? Amber Case, Cerutti, Cheatham, Darden, Duke, Giese, Gohlke, Goetz, Greene, Homeyer, Izadi, Kovalenko, Lee, LeGrand, Li, Lin, Liu, Luchko, Luo, Mermelstein, Merz, Monard, Nguyen, Omelyan, Onufriev, Pan, Qi, Roe, Roitberg, Sagui, Simmerling, Botello-Smith, Swails, Walker, Wang, Wolf, Wu, Xiao, York and Kollman
6 data analysis ? TopSpin Bruker Biospin
7 refinement ? Amber Case, Cerutti, Cheatham, Darden, Duke, Giese, Gohlke, Goetz, Greene, Homeyer, Izadi, Kovalenko, Lee, LeGrand, Li, Lin, Liu, Luchko, Luo, Mermelstein, Merz, Monard, Nguyen, Omelyan, Onufriev, Pan, Qi, Roe, Roitberg, Sagui, Simmerling, Botello-Smith, Swails, Walker, Wang, Wolf, Wu, Xiao, York and Kollman
8 peak picking ? CARA Keller and Wuthrich