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Organism Classification
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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
5M9D
pdb_00005m9d
10.2210/pdb5m9d/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
3D 1H-15N NOESY
2
3D 1H-13C NOESY aliphatic
3
3D 1H-13C NOESY aromatic
4
3D CBCA(CO)NH
5
3D HCCH-TOCSY
6
F1-13C/15N-filtered NOESY-[13C,1H]-HSQC
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
NMR Refinement
Method
Details
Software
molecular dynamics
?
6
NMR Ensemble Information
Conformer Selection Criteria
structures with the lowest energy
Conformers Calculated Total Number
50
Conformers Submitted Total Number
20
Representative Model
1 (lowest energy)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
collection
3.2
TopSpin
Bruker Biospin
2
structure calculation
3.97
CYANA
Guntert, Mumenthaler and Wuthrich
3
chemical shift assignment
?
Sparky
Goddard
4
peak picking
?
Sparky
Goddard
5
collection
3.2
TopSpin
Bruker Biospin
6
refinement
16
Amber
Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman