ELECTRON MICROSCOPY

Sample

Rhinovirus C15a

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument GATAN CRYOPLUNGE 3
Cryogen Name ETHANE
Sample Vitrification Details ?
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 8973
Reported Resolution (Å) 2.79
Resolution Method FSC 0.143 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol RIGID BODY FIT
Refinement Target Correlation coefficient
Overall B Value ?
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type GATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å2) 25.7
Imaging Experiment
Date of Experiment ?
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) ?
Maximum Defocus (nm) ?
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2.7
Imaging Mode BRIGHT FIELD
Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification 14000
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
PARTICLE SELECTION EMAN2 2.06
PARTICLE SELECTION DoG Picker ?
IMAGE ACQUISITION Leginon 3.1
CTF CORRECTION fitctf2.py ?
MODEL FITTING UCSF Chimera 1.11
MODEL REFINEMENT PHENIX 1.10.1-2155
MODEL REFINEMENT Coot 0.8.2
INITIAL EULER ASSIGNMENT jspr ?
FINAL EULER ASSIGNMENT jspr ?
CLASSIFICATION RELION 1.3
RECONSTRUCTION jspr ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
PHASE FLIPPING ONLY CTF correction was performed on the fly during 2D alignment and 3D reconstruction.