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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
5GAI
pdb_00005gai
10.2210/pdb5gai/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
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MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ELECTRON MICROSCOPY
Sample
Enterobacteria phage P22
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK III
Cryogen Name
ETHANE
Sample Vitrification Details
Blot for 2 seconds before plunging.
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
79731
Reported Resolution (Å)
10.5
Resolution Method
FSC 0.143 CUT-OFF
Other Details
?
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector Type
GATAN ULTRASCAN 10000 (10k x 10k)
Electron Dose (electrons/Å
2
)
25
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
JEOL 3200FSC
Minimum Defocus (nm)
1000
Maximum Defocus (nm)
4000
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
4.1
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
JEOL 3200FSC CRYOHOLDER
Nominal Magnification
40000
Calibrated Magnification
70600
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
PARTICLE SELECTION
ETHAN
1.0
CTF CORRECTION
EMAN
1
INITIAL EULER ASSIGNMENT
MPSA
?
FINAL EULER ASSIGNMENT
MPSA
?
CLASSIFICATION
MPSA
?
RECONSTRUCTION
MPSA
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION
?
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