ELECTRON MICROSCOPY

Sample

VAT (CDC48 HOMOLOGUE)

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument FEI VITROBOT MARK III
Cryogen Name ETHANE-PROPANE
Sample Vitrification Details VITRIFICATION 1 -- CRYOGEN- ETHANE-PROPANE MIXTURE, HUMIDITY- 100, INSTRUMENT- FEI VITROBOT MARK III, METHOD- BLOT FOR 4 SECONDS BEFORE PLUNGING, DETAILS- SAMPLE HELD AT 4 DEGREES CELSIUS BEFORE FREEZING
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 71258
Reported Resolution (Å) 7.0
Resolution Method ?
Other Details HOMOLOGY MODEL WAS FLEXIBLY FIT INTO DENSITY, THEN STEREO- CHEMICALLY REFINED SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-3436. (DEPOSITION ID: 14486).
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol FLEXIBLE FIT
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details METHOD--MOLECULAR DYNAMICS FLEXIBLE FITTING REFINEMENT PROTOCOL--EM
Data Acquisition
Detector Type GATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å2) 32
Imaging Experiment
Date of Experiment 2015-05-01
Temprature (Kelvin)
Microscope Model FEI TECNAI F20
Minimum Defocus (nm) 1800
Maximum Defocus (nm) 3500
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2
Imaging Mode BRIGHT FIELD
Specimen Holder Model .
Nominal Magnification 25000
Calibrated Magnification 34483
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 200
Imaging Details ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
? EACH MICROGRAPH