ELECTRON MICROSCOPY

Sample

HUMAN PARECHOVIRUS 3

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument LEICA EM GP
Cryogen Name ETHANE
Sample Vitrification Details LIQUID ETHANE
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 8889
Reported Resolution (Å) 4.3
Resolution Method ?
Other Details WE DID NOT MODELLED DISORDERED REGIONS. THE PROVIDE COORDINATES ARE FOR AN ASYMMETRIC UNIT OF THE VIRUS. IN ORDER TO GENERATE THE WHOLE CAPSID, PLEASE USE THE MATRICES PROVIDED IN REMARK 350. SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-3137. (DEPOSITION ID: 13643).
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol OTHER
Refinement Target Cross-correlation coefficient
Overall B Value ?
Fitting Procedure ?
Details METHOD--LOCAL CORRELATION REFINEMENT PROTOCOL--HOMOLOGY MODEL
Data Acquisition
Detector Type FEI FALCON II (4k x 4k)
Electron Dose (electrons/Å2) 36
Imaging Experiment
Date of Experiment 2015-01-21
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) 420
Maximum Defocus (nm) 2340
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 0.01
Imaging Mode BRIGHT FIELD
Specimen Holder Model .
Nominal Magnification 59000
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
CTF CORRECTION CTFFIND 3
OTHER ResMap ?
PARTICLE SELECTION ETHAN ?
RECONSTRUCTION Auto3DEM ?
RECONSTRUCTION EMAN 1
RECONSTRUCTION EMAN 2
RECONSTRUCTION RELION ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
? MICROGRAPHS