Home
About
Browse
Covid-19
Organism Classification
Alphafold Collection
Indian Data
Contact
Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
5AJ0
ELECTRON MICROSCOPY
Sample
NATIVE RIBOSOMAL COMPLEX FROM POLYSOMES - POST STATE
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK II
Cryogen Name
ETHANE
Sample Vitrification Details
VITRIFICATION 1 -- CRYOGEN- ETHANE, HUMIDITY- 100, TEMPERATURE- 93, INSTRUMENT- FEI VITROBOT MARK II, METHOD- BLOT FOR 2-4 SECONDS BEFORE PLUNGING,
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
313321
Reported Resolution (Å)
3.500
Resolution Method
?
Other Details
SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2875. (DEPOSITION ID: 13060).
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
?
Refinement Target
?
Overall B Value
?
Fitting Procedure
?
Details
?
Data Acquisition
Detector Type
TVIPS TEMCAM-F416 (4k x 4k)
Electron Dose (electrons/Å
2
)
20.00
Imaging Experiment
Date of Experiment
2012-08-20
Temprature (Kelvin)
Microscope Model
FEI TITAN KRIOS
Minimum Defocus (nm)
2000.00
Maximum Defocus (nm)
4500.00
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.00
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
115000
Calibrated Magnification
205000
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
DATA WAS COLLECTED AUTOMATICALLY WITH LEGINON
Imaging Experiment
Task
Software Package
Version
CTF CORRECTION
CTFFIND
3
PARTICLE SELECTION
Signature
?
RECONSTRUCTION
SPARX
?
RECONSTRUCTION
SPIDER
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
?
DEFOCUS GROUPS