ELECTRON MICROSCOPY

Sample

COPI COAT LINKAGE IV ON THE MEMBRANE

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument HOMEMADE PLUNGER
Cryogen Name ETHANE
Sample Vitrification Details LIQUID ETHANE
3D Reconstruction
Reconstruction Method TOMOGRAPHY
Number of Particles 1205
Reported Resolution (Å) 21
Resolution Method ?
Other Details HOMOLOGY MODELS WERE FITTED INTO THE EM MAP USING THE MDFF (MOLECULAR DYNAMICS FLEXIBLE FITTING) SOFTWARE. DUE TO LOW RESOLUTION OF THE EM MAP USED FOR FITTING, WE DEPOSIT ONLY THE BACKBONE ATOMS. SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2989. (DEPOSITION ID: 13343).
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol RIGID BODY FIT
Refinement Target Cross-correlation coefficient
Overall B Value ?
Fitting Procedure ?
Details METHOD--RIGID BODY REFINEMENT PROTOCOL--HOMOLOGY-MODEL
Data Acquisition
Detector Type GATAN MULTISCAN
Electron Dose (electrons/Å2) 45
Imaging Experiment
Date of Experiment 2014-02-07
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) 1500
Maximum Defocus (nm) 4000
Minimum Tilt Angle (degrees) -45
Maximum Tilt Angle (degrees) 60
Nominal CS 2.7
Imaging Mode BRIGHT FIELD
Specimen Holder Model .
Nominal Magnification 42000
Calibrated Magnification ?
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 200
Imaging Details ?
Imaging Experiment
Task Software Package Version
MODEL FITTING UCSF Chimera ?
RECONSTRUCTION AV3 ?
RECONSTRUCTION TOM Toolbox ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
? PHASE FLIPPING OF INDIVIDUAL TILTS
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