X-RAY DIFFRACTION

Crystallization Details
Method pH Temprature Details
X-RAY DIFFRACTION ? 294 0.1-0.2 mM RNA in 10 mM Na Cacodylate pH 7, 50 mM NaCl, 10 mM MgCl2, 2.5 mM MnCl2. Crystallized in about 2 months with a mother liquor of 40 mM Na cacodylate pH 6, 15% MPD, 80 mM SrCl2, 12 mM spermine tetra-HCl at 21 C. Crystals were cryo-protected by addition of 20% PEG-400 directly before freezing.
Unit Cell:
a: 50.419 Å b: 62.510 Å c: 69.969 Å α: 116.21° β: 101.83° γ: 98.83°
Symmetry:
Space Group: P 1
Crystal Properties:
Matthew's Coefficient: 2.88 Solvent Content: 57.31
Refinement Statistics
Diffraction ID Structure Solution Method Cross Validation Method Resolution Limit (High) Resolution Limit (Low) Number of Reflections (Observed) Number of Reflections (R-free) Percent Reflections (Observed) R-Work R-Free Mean Isotropic
X-RAY DIFFRACTION SAD FREE R-VALUE 2.24 47.4 29646 1742 89.06 0.2017 0.2415 ?
Data Collection
Overall
Resolution Limit (High) Resolution Limit (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.24 47.4 90 0.053 ? 17.6 3.2 ? 32334 ? ? ?
Highest Resolution Shell
# Resolution Limits (Low) Resolution Limits (High) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1 2.24 2.32 95 ? ? 2.1 3.2 ?
Diffraction
Diffraction experiment
Crystal ID Scattering Type Data Collection Temprature Detector Detector Type Details Collection Date Monochromator Protocol
1 80 K ?
Radiation Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 24-ID-C 0.769 APS 24-ID-C
Software
Software Name Purpose Version
PHENIX refinement (phenix.refine: dev_1555)
XDS data reduction .
Aimless data scaling .
PHENIX phasing (phenix.refine: dev_1555)
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