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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
4V5M
pdb_00004v5m
10.2210/pdb4v5m/pdb
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FASTA
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Binary MMCIF
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Structure Factors
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Validation File (XML)
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ELECTRON MICROSCOPY
Sample
70S-EFG-GDP-FA COMPLEX
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK I
Cryogen Name
ETHANE
Sample Vitrification Details
VITRIFICATION 1 -- CRYOGEN- ETHANE, INSTRUMENT- VITROBOT (FEI)
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
?
Reported Resolution (Å)
7.8
Resolution Method
?
Other Details
SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-1798.
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
OTHER
Refinement Target
?
Overall B Value
?
Fitting Procedure
?
Details
METHOD--MDFIT REFINEMENT PROTOCOL--X-RAY
Data Acquisition
Detector Type
KODAK SO-163 FILM
Electron Dose (electrons/Å
2
)
20
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI POLARA 300
Minimum Defocus (nm)
2000
Maximum Defocus (nm)
4000
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.0
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
39000
Calibrated Magnification
65520
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
LOW-DOSE
Imaging Experiment
Task
Software Package
Version
MODEL FITTING
GROMACS
?
RECONSTRUCTION
SPIDER
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
.
DEFOCUS GROUPS