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Protein Name
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Summary
Structure Feature
Experiment
Ligands & Environment
4V3P
pdb_00004v3p
10.2210/pdb4v3p/pdb
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Structure Factors
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Validation File (XML)
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ELECTRON MICROSCOPY
Sample
POLY-RIBOSOME FROM IN VITRO WHEAT GERM SYSTEM
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
VITRIFICATION 1 --CRYOGEN- ETHANE, HUMIDITY-95, TEMPERATURE- 120,INSTRUMENT- FEI VITROBOT MARK IV, METHOD- 3UL OF SAMPLE APPLIED ON 300 MESH HOLY CARBON QUANTIFOIL GRID. BLOTTING WAS DONE IN VITROBOT MARK IV, BLOT TIME 0.5 SEC, BLOT FORCE 5
3D Reconstruction
Reconstruction Method
SUBTOMOGRAM AVERAGING
Number of Particles
106
Reported Resolution (Å)
34
Resolution Method
?
Other Details
SUBMISSION BASED ON EXPERIMENTAL DATA
Refinement Type
Symmetry Type
HELICAL
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
?
Overall B Value
?
Fitting Procedure
?
Details
METHOD--RIGID BODY REFINEMENT PROTOCOL--X-RAY
Data Acquisition
Detector Type
FEI FALCON I (4k x 4k)
Electron Dose (electrons/Å
2
)
30
Imaging Experiment
Date of Experiment
2013-01-01
Temprature (Kelvin)
Microscope Model
FEI TECNAI F30
Minimum Defocus (nm)
2000
Maximum Defocus (nm)
4000
Minimum Tilt Angle (degrees)
-70
Maximum Tilt Angle (degrees)
70
Nominal CS
2
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
?
Nominal Magnification
39000
Calibrated Magnification
41176
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
150
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
MODEL FITTING
UCSF Chimera
?
RECONSTRUCTION
IMAGIC
?
RECONSTRUCTION
IMOD
?
RECONSTRUCTION
Xmipp
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details